I bet it is the stator, I had the same problem with my RM250A. The bike was running fine, pulled it down for a freshen up, new piston/rings clean carb fit new boyesen reeds etc. put it back together and the bike was hard to start, pulled the barrel off pulled the carb appart put different piston in put standard reeds back in, still no good wont run cleanly has no power. At this stage I am about to set fire to the peice of shit. I decided to have the stator rewound and tested and hey presto the bike starts first kick now and has shitloads more power than ever before. The bloke that rebuilt the stator reckons he hears this story all the time, apparently the new compression put the flame out if the stator is a bit tired.
If you are in brisbane you can borrow my stator to test if you like, they might be the same.
Brian